Introduction

MotifClick is a regulatory motif finding program, coded by standard C++ and compiled by GNU C++ compiler under Linux, Mac, and Windows

Software download: Click here to download the sourcecode and executable command-line package

Research Funding: The project is funded by a grant (EF0849615) from National Science Foundation.

Motif Click
 

Download Test Dataset

  • Fasta orthologous intergenic sequence sets (Target genome: Saccharomyces cerevisiae; Reference genomes include: Saccharomyces bayanus, Saccharomyces castellii, Saccharomyces kluyveri, Saccharomyces kudriavzevii, Saccharomyces mikatae, Saccharomyces paradoxus)

  • Fasta orthologous interoperonic sequence sets from E. coli K12 and 55 gamma-proteobacterial genomes (the list of genomes can be found in the supplementary file of PubMed:19383880)

  • Fasta synthetic datasets of yeast

  • Fasta synthetic datasets of E.coli

  • The Su Lab website
    Genomics and Bioinformatics Department
    9201 University City Blvd, Charlotte, NC 28223
    Zhang, Shaoqiang; Li, Shan; Niu, Meng; Pham, Phuc; Su, Zhengchang